Bacterial and Fungal Microorganisms Diversity of Machilipatnam Coast (India)
Keywords:
Mangroves, Bacteria, Fungi,, DiversityAbstract
The present study on the Microorganisms Diversity of Machilipatnam Coast in the mangrove region leads to findings of several species of Bacteria and Fungi belonging to various genera. These microorganisms are taxonomically diverse and genetically special. Mangroves are an important part of the coasts acting as an intermediary zone between land and water. In the present study Field Collection trips were undertaken at Station I (Pedapatnam) and Station II (Polatitippa) for a period of one year spanning between January 2017 and January 2018. Sediment Sampling was done at regular intervals. Water samples were collected from the stations just below the surface, Sediment samples were analysed for concentration of organic matter, Nitrogen, Phosphorous, Potassium, Zinc, Copper, Iron and Manganese. This helped in determining the ecological factors for the growth of microorganisms. Mangroves are rich in bacterial flora. The bacterial population is huge and greater than Fungi. In the marine environment 90% of the bacteria are Gram negative as their cell wall is better adapted for survival. The open sea is a fungal desert where yeast or lower Fungi are attached to planktonic organisms or pelagic animals. The higher marine Fungi occur as parasites on plants and animals or as symbionts in marine lichens and algae. Samples were collected using Grabs, the central portion of the sediment sub samples were collected aseptically by alcohol rinsed polyvinyl core with 3 cm diameter. The top fraction of the sediment samples were used for analysis.
Downloads
References
Abdel-Monem NM, Abdel-Azeem AM, El-Ashry ES, Ghareeb DA, Nabil-Adam A (2013). Pre-treatment hepato-protective effect of the marine fungus derived from sponge on hepatic toxicity induced by heavy metals in rats. Biomed.Res.Int.
Adeyemo OK, Adedokun OA, Yusuf RK, Adeleye E A (2008): Seasonal changes in physico-chemical parameters and nutrient load of river sediments in Ibadan city, Nigeria. Global NEST J.
Amend AS, Barshis DJ, Oliver TA ( 2012): Coral-associated marine fungi form novel lineages and heterogeneous assemblages. ISME J 6.
Ashok G, Senthilkumar G and Paneerselvam A (2015): Diversity and Seasonal Variation of Soil Fungi isolated from Coastal area of Tuticorin Dt.,Tamil nadu, India. Int.J.Curr.Microbiol.App.Sci.
Baltar F and Aristegui J (2017): Fronts at the surface ocean can shape distinct regions of Microbial Activity and Community assemblages down to the Bathy pelagic zone: The Azore front as a case study. Frontiers in marine Science.
Bass D, Howe A, Brown N, Hannah B, Maria D, Harlan M, Lily Li,Holly S, Sarah C, Watkinson, Simon W, Richards AT (2007): Yeast forms dominate fungal diversity in the deep oceans. P Roy Soc B-Biol Sci 274.
Blunt JW, Carroll AR, Copp BR (2018): Marine natural products. Nat Prod Rep 35.
Burgaud GT, LeCalvez D, Arzur P, Vandenkoornhuyse, Barbier G (2009): Diversity of culturable marine filamentous fungi from deep-sea hydrothermal vents. Environ Microbiol.
Dalmaso GZL, Ferreira D, Vermelho AB (2015): Marine Extremophiles: A Source of Hydrolases for Biotechnological Applications. Mar. Drugs 13.
Damare S, Raghukumar C, Raghukumar S (2006): Fungi in deep-sea sediments of the Central Indian Basin. Deep Sea Res 53.
Damare S, Raghukumar C, Raghukumar S (2006): Fungi in deep-sea sediments of the Central Indian Basin. Deep Sea Res 53.
Damare S, Raghukumar C, Raghukumar S (2006): Fungi in deep-sea sediments of the Central Indian Basin. Deep Sea Res 53.
Dang H, Wang C, Li J, Li T, Tian F, Jin W (2009) : Diversity and distribution of sediment nirS-encoding bacterial assemblages in response to environmental gradients in the eutrophied Jiaozhou Bay, China. Microb Ecol. 58.
Danovano R and Pusceddu A (2007): Biodiversity and ecosystem functioning in coastal lagoons: does microbial diversity play any role? Estuar Coast Shelf Sci 75.
Debbab A, Aly AH, Kjer J, Proksch P (2010): Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products. Fungal Divers.
Deshmukh SK, Prakash V, Ranjan N (2018): Marine Fungi: A Source of Potential Anticancer Compounds. Front Microbiol.
Dias ACF, Andreote FD, Dini-Andreote F, Lacava PT, Sa ALB, Melol S, Azevedo JL, Araujo WL (2009): Diversity and biotechnological potential of culturable bacteria from Brazilian mangrove sediment. World J Microbiol Biotechnol 25.
Dias ACF, Andreote FD, Rigonato J, Fiore MF, Melo IS, Araujo WL (2010): The bacterial diversity in Brazilian non disturbed man-grove sediment. Antonie Van Leeuwenhoek 98.
Feng L, Ou X, He H, Hu H, Zhang X(2009): Control of Capsicum phytophthora blight by endophytic bacteria RS261 from mangrove. Acta Phytopathol Sinica .
Garcias-Bonet NG, Arrieta JM, Santana CN, Duarte CM, Marbá N(2012): Endophytic bacterial community of a Mediterranean marine angiosperm (Posidonia oceanica). Front Microbiol 3.
Gomes NCM, Flocco CG, Costa R, Junca H, Vilchez R, Pieper DH, Krogerrecklenfort E, Paranhos R, Mendoca-Hagler LCS, Smalla K (2011): Mangove microniches determine the structural and functional diversity of enriched petroleum hydrocarbo- degrading consortia. FEMS Microb .
Gutierrez T, Singleton DR, Berry D, Yang T, Aitken MD, Teske A (2011): Hydrocarbon-degrading bacteria enriched by the Deepwater Horizon oil spill identified by cultivation and DNA-SIP. ISME J. 7.
Haas AF, Nelson E, Wegley Kelly L, Carlson CA, Rohwer F, Lichter JJ (2011): Effect of coral reef benthic primary producers on dissolved organic carbon and microbial activity. PloS ONE6.
Hawksworth DL and Colwell RR (2012): Biodiversity amongst microorganisms and its relevance. Biodivers.Conserv.
Hewson I, Moisander P H, Achilles KM, Carlson CA, Jenkins BD (2007): Characteristics of diazotrophs in surface to abyssopelagic waters of the Sargasso Sea. Aquat. Microb. Eco,46.
Holler U, Wright AD, Matthée GF, Konig GM, Draeger S, Aust H, Schulz B (2000): Fungi from marine sponges: diversity, biological activity and secondary metabolites. Mycological Research.
Hou D, Huang Z, Zeng S, Liu J, Wei D, Deng X (2017): Environmental factors shape water microbial community structure and function in shrimp cultural enclosure ecosystems. Front. Microbiol.
Hu Simin, Guo Zhiling, Li Tao ( 2015): Molecular analysis of insitu diets of coral reef copepods: evidence of terrestrial plantdetritus as a food source in Sanya Bay, China. Journal of Plank-ton Research, 37.
Hyde K D, Pointing SB (2000): Marine Mycology – A Practical Approach. Hong Kong: Fungal DiversityPress.
Inagaki T, Nunoura S, Nakagawa A, Teske,M, Lever A, Lauer M, Suzuki K, Takai M, Delwiche FS, Colwell KH, Nealson K, Horikoshi S, D’Hondt BB, Jorgensen (2006): Bio-geographical distribution and diversity of microbes in methane hydrate-bearing deep marine sediments on the Pacific Ocean Margin. Proceedings of the National Academy of Sciences USA, 103.
Janarthine RSS, Eganathan P, Balasubramanian T (2010): Plant growth promoting of endophytic Bacillus cereus isolated from the pneumatophores of Avicennia marina . Int J Curr Res 5.
Jones SE, Newton RJ, McMahon KD (2009). Evidence for structuring of Bacterial community composition by organic carbon source in temperate lakes. Environ. Microbiol 11.
Kamaruzzaman BY, Waznath AS, Ong MC, Shahbudin S, Jalal KCA( 2009): Variability of organic carbon content in bottom sediment of Pahang river estuary, Pahang, Malasiya. J. Appl. Sci., 9.
Kiranmai MR and Anima SD (2017): Isolation of marine Bacteria from Visakhapatnam Coast for degradation of oil . Omicsonline.Org.
Kirk JL, Beaudette LA, Hart M, Moutoglis P, Klironomos JN, Lee H, Trevors JT (2008). Methods of studying microbial diversity. Journal of Microbiological Method.
Kis-Papo T (2005): Marine fungal communities. The Fungal Community: Its Organisation and Role .Ecosystem, ed.
Koh L, Tan TK, Chou LM, Goh NK (2000): Fungi associated with gorgonians in Singapore. Proceedings 9th international coral reef symposium.
Kohlmeyer J, Kohlmeyer E (1979): Marine Mycology-The Higher Fungi. New York, USA: Academic Press.
Le Calvez T,Burgaud G,Mahe S,Barbier G(2009): Fungal Diversityin deep sea Hydrothermal Ecosystems. Applied and Environmental Microbiology.
Li LT, Yan B L, Li SH, Xu JT, An XH (2016): A comparison of bacterial community structure in seawater pond with shrimp, crab, and shellfish cultures and in non-cultured pond in Ganyu, Eastern China. Ann. Microbiol
Lima-mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F (2015): Determinants of community structure in the global plankton interactome. Science.
Lindstrom ES and Langenheder S (2005): Local and regional factors influencing bacterial community assembly. Env Microbiol.
Littman R, Willis BL, Bourne DG (2011): Metagenomic analysis of the coral holobiont during a natural bleaching event on the Great Barrier Reef. Environ Microbiol Rep 3.
Liu YL, Chen G, Chen XC (2010): Isolation of endophyte bacteria from mangrove and screening of antagonistic strains against dematiaceous fungi. China Trop Medic 01.
Maria GL and Sridhar KR( 2003): Diversity of filamentous fungi on woody litter of five mangrove plant species from the south west coast of India. Funga. Diver14.
Marlis Reich and Antje Labes(2017): How to boost marine fungal research: A first step towards a multi disciplinary approach by combining molecular fungal ecology and natural products chemistry. Marine Genomics.
Massana R and Logares R (2013): Eukaryotic versus prokaryotic marine picoplankton ecology. Environ Microb 15.
Mejanelle L, Lopez JF, Gunde-Cimerman N, Grimalt J O (2000): Sterols of melanized fungi from hyper saline environments. Org. Geochem.
Mihaljevic JR (2012): Linking metacommunity theory and symbiont evolutionary ecology. Trends Ecol. Evol.
Mora C, Tittensor DP, Adl S, Simpson AGB, Wom B (2011): How many species are there on Earth and in the Ocean. Plos/Biology.
Nakagiri A (2012): Culture collections and maintenance of marine fungi. Jones E.B.G et al. (Ed) Marine fungi and fungi like organisms. Marine and Freshwater Botany.
Nambiar RG and Raveendran K (2008): Biodiversity of marine marine mangrove fungi of Valapattanam and Pichavaram mangrove forest (south India). Eco-Chronicle.
Nicoletti R and Andolfi A (2018): The Marine Derived Filamentous Fungi in Biotechnology. Grand Challenges . Marine Bio-Technology.
Overy D, Teppo Rama P, Rylee Oosterhuis , Allison K, Walker, Ka-Lai Pang (2019): The neglected marine fungi, sensu stricto, and their isolation from natural products. Marine Drugs.
Poli A, Finore I, Romano I, Gioiello A, Lama L, Nicolaus B (2017): Microbial diversity in extreme marine habitats and their Biomolecules. Microorganims.
Prince L and Samuel P (2015): A Study on the Diversity of Marine Fungi along the South East Coast of Tamilnadu A Statistical Analysis. International Journal of Current Microbiology and Applied Sciences.
Ragavan P and Mandal RN( 2018) : Status of Indian Mangroves. Oceanography and fisheries open access journal.
Raghukumar C and Ravindran J (2012): Fungi and their role in corals and coral reef ecosystems. Biology of marine fungi. Springer, Berlin, Germany.
RaghuKumar CS, RaghuKumar G,Sheelu (2004): Buried in time. Culturable fungi in deep sea sediment core from chagos trench. Indian Ocean. Deep-Sea Res.
Richards TA, Jones MD, Leonard G, Bass D (2012): Marine fungi: their ecology and molecular diversity. Annual Review of Marine Science.
Roy S,Hens D,Biswas D,Kumar R (2002): Survey of petroleum degrading bacteria in coastal waters of Sunderban biosphere reserve. World J Microbiol Biotechnol.
Sabet S, Diallo L, Hays L, Jung W, Dillon JG (2009): Charecterization of halophiles isolated from solar lanterns in Baja, California, Mexico. Extremophiles 13.
Sahu MK, Sivakumar K, Kannan ( 2006): Marine Realm: A treasure house for bioprospecting. Asian Journal of Microbiol Biotech, Env. Sci 9.
Saleem M (2015): Loss of microbiome ecological niches and diversity by global change and trophic downgrading. Microbiome Community Ecology?: Fundamentals and Applications.
Sarma VV, Hyde KD and Vittal BPR (2001): Frequency of occurence of mangove fungi from the east coast of India. Hydrobiolagia 455.
Sarma VV,Vittal BPR (2001): Biodiversity of manglicolous fungi on selected plants in the Godavari and Krishna deltas, East coast of India. Funga Diver 6.
Schauer R, Bienhold C, Ramette A, Harder J (2010): Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean. The ISME Journal.
Schoch CL, Seifert KA, Huhndorf S (2009): Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi. Proceedings of the National Academy of Sciences of the United States of America, 109.
Sette L D and Bonugli-Santos RC (2013): Ligninolytic enzymes from marine-derived fungi: production and applications, Marine Enzymes for Biocatalysis: Sources Biocatalytic Characteristics and Bioprocesses of Marine Enzymes ed.
Singh P, Raghukumar C, Verma P , Shouche Y (2012): Assessment of fungal diversity in deep-sea sediments by multiple primer approach. World J Microbiol Biotechnol 28.
Sonia AD,Aline BP,Maria CC,Daiane RP,Roberta AMC, Ana JF,Cardoso de Oliveira (2018): Density and diversity of filamentous fungi in the water and sedimentof Araca Bay in Sao Sebastiao, Sao Paulo, Brazil. Biota Neotropica.
SriRamkumar V and Kannapiran E ( 2011): Isolation of total heterotrophic bacteria and phosphate solubilizing bacteria and in vitro study of phosphatase activity and production of phytohormones by PSB. Archives of Applied Science Research.
Swan BK, Martinez-Garcia M, Preston CM, Sczyrba A, Woyke T, Lamy D, Reinthaler T, Poulton NJ, Masland ED, Gomez ML, Sieracki ME, DeLong EF, Herndl GJ, Stepanauskas R (2011): Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean. Science.
Thennarasu V, Panneerselvam A , Thajuddin N( 2011): An investigation of the mycoflora in marine soil from Andaman Islands. European journal of experimental biology, 1.
Treusch AH, Vergin KL, Finlay LA, Donatz MG, Burton RM, Carlson CA, Giovannoni SJ :(2009). Seasonality and vertical structure of microbial communities in an ocean gyre. ISME J
Venkatachalam S, Isabelle JA, Adriana M, Lebohang TM (2017): A pivotal role for ocean eddies in the distribution of microbial communities across the Antarctic Circumpolar current. PLoS ONE 12.
Vittal BPR and Sarma VV(2007): Diversity and ecology of fungi on mangroves of Bay of Bengal region-An overview. Indian Journal of Geo-Marine Sciences 35.
Downloads
Published
How to Cite
Issue
Section
License
Copyright (c) 2019 Srinivasa Rao, Khudsia Hussain
This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License.
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license unless indicated otherwise in a credit line to the material. If the material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/ licenses/by/4.0/